BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037C03SP1|AL430360
(813 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig818 1481 0.0
>3x_Contig818
Length = 3225
Score = 1481 bits (732), Expect = 0.0
Identities = 783/814 (96%), Gaps = 2/814 (0%)
Strand = Plus / Minus
Query: 1 cccgaattgattatcaacggggacactkaactagaattctatttcctaccatcgcatcta 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2333 cccgaattgattatcaacggggacactgaactagaattctatttcctaccatcgcatcta 2274
Query: 61 aagttcctattgggagaaatcttaagaaacagctacgaa-tgactgtcaargaraccata 119
||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||
Sbjct: 2273 aagttcctattgggagaaatcttaagaaacagctacgaagtgactgtcaaggagaccata 2214
Query: 120 cgattgggactagaaaargcacctccggtgacagtatactataatatcgaatgaccaaag 179
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2213 cgattgggactagaaaaggcacctccggtgacagta-actataatatcgaatgaccaaag 2155
Query: 180 ttatcttttcagaatcagtgatakwtktggtkgaktkccayattyttttawgcwtwtatg 239
||||||||||||||||||||||| |||| || | ||| ||| | || || ||||
Sbjct: 2154 ttatcttttcagaatcagtgatagaggtggtggagtgccacattctgataagcagatatg 2095
Query: 240 gtcctttgktaaatcaaaakagctagccaakcaatccctagacaacttccatcwcttgcc 299
|||||||| |||||||||| |||||||||| |||||||||||||||||||||| ||||||
Sbjct: 2094 gtcctttggtaaatcaaaagagctagccaagcaatccctagacaacttccatcacttgcc 2035
Query: 300 tggattkcwgaytttktcgttatatgattcttctaayggtgctcatctaaaatcagatcg 359
|||||| | || ||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2034 tggattgcagactttgtcgttatatgattcttctaacggtgctcatctaaaatcagatcg 1975
Query: 360 ttacagacaaacatcgctagatcggatgtcagaaaacaatttgacgaaaggtaaatttaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1974 ttacagacaaacatcgctagatcggatgtcagaaaacaatttgacgaaaggtaaatttaa 1915
Query: 420 agttggacaaccgctaatggagcttctcaaacgatctcccagatataaacttggaattgg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1914 agttggacaaccgctaatggagcttctcaaacgatctcccagatataaacttggaattgg 1855
Query: 480 tctcgcactatgcaaagtatatgccgaatattggaacggtgatttgaccgtacattctat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1854 tctcgcactatgcaaagtatatgccgaatattggaacggtgatttgaccgtacattctat 1795
Query: 540 tcaaggttacggtaccgataccgttctcaaactaggaaatttgatgaggcatacggacaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1794 tcaaggttacggtaccgataccgttctcaaactaggaaatttgatgaggcatacggacaa 1735
Query: 600 attgcaattggatagagtttagtaaaccaagttagcaatgcttatagtaatgtatagtaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1734 attgcaattggatagagtttagtaaaccaagttagcaatgcttatagtaatgtatagtaa 1675
Query: 660 ccactctatataccgatatttacttatttatatcatcattcgatgacttatggtcgtttg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1674 ccactctatataccgatatttacttatttatatcatcattcgatgacttatggtcgtttg 1615
Query: 720 gcataggaaagcgttttattattacccgcacaaatagatttcgccacatttcgaaagada 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1614 gcataggaaagcgttttattattacccgcacaaatagatttcgccacatttcgaaagaaa 1555
Query: 780 gttgaaatagatacaggatgcgtttggaataact 813
||||||||||||||||||||||||||||||||||
Sbjct: 1554 gttgaaatagatacaggatgcgtttggaataact 1521
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4340
Number of Sequences: 1807
Number of extensions: 4340
Number of successful extensions: 81
Number of sequences better than 1.0e-20: 1
length of query: 813
length of database: 10,358,551
effective HSP length: 16
effective length of query: 797
effective length of database: 10,329,639
effective search space: 8232722283
effective search space used: 8232722283
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.6 bits)